Publications
2024
40. Alagia A., Di Fazio A., Ajit K., Long Q. and Gullerova M. NSUN2 Facilitates DICER Cleavage of DNA Damage-Associated R-Loops to Promote Repair, under review
39. Long Q., Ajit K., Sedova K., Haluza V., Stefl R., Dokaneheifard S., Beckedorff F., Valencia MG., Sebesta M., Shielhattar R. and Gullerova M. Tetrameric INTS6-SOSS1 complex facilitates DNA:RNA hybrid autoregulation at double-strand breaks. In revision
38. Glossop M, Chelysheva I, Ketley RF, Alagia A, , Fournier M and Gullerova M. TIRR regulates mRNA export in response to DNA damage. In revision
37. Zhichao Liu, Kamal Ajit, Yupei Wu, Wei-Guo Zhu and Monika Gullerova. GATAD2B-NuRD complex drives DNA:RNA hybrids dependent chromatin boundary formation in response to DNA damage, EMBO Journal, in press
36. Kamal Ajit, Adele Alagia, Kaspar Burger and Monika Gullerova. Tyrosine 1 phosphorylated RNA polymerase II transcribes PROMPTs to promote proximal promoter pausing and induce global transcriptional repression in response to DNA damage. Genome Research. 2024 March, doi: 10.1101/gr.278644.123.
35. Zhang J, Chen F, Tang M, Xu W, Tian Y, Liu Z, Shu Y, Yang H, Zhu Q, Lu X, Peng B, Liu X, Xu X, Gullerova M, Zhu WG. The ARID1A-METTL3-m6A axis ensures effective RNase H1-mediated resolution of R-loops and genome stability. Cell Reports. 2024 Feb, DOI: 10.1016/j.celrep.2024.113779
2023
34. Long Q, Sebesta M, Sedova K, Haluza V, Alagia A, Liu Z, Stefl R, Gullerova M. The phosphorylated trimeric SOSS1 complex and RNA polymerase II trigger liquid-liquid phase separation at double-strand breaks. Cell Reports. 2023 Dec. doi: 10.1016/j.celrep.2023.113489.
33. Zhang X, Zhao Q, Wang T, Long Q, Sun Y, Jiao L, Gullerova M. DNA damage response, a double-edged sword for vascular aging. Ageing Res Rev. 2023 Dec. doi: 10.1016/j.arr.2023.102137.
32. Alagia A, Tereňová J, Ketley RF, Di Fazio A, Chelysheva I, Gullerova M. Small vault RNA1-2 modulates expression of cell membrane proteins through nascent RNA silencing. Life Sci Alliance. 2023 Apr 10;6(6):e202302054. doi: 10.26508/lsa.202302054. Print 2023 Jun.
31. Alagia A, Ketley RF, Gullerova M. Detecting RNA-protein proximity at DNA double-strand breaks using combined fluorescence in situ hybridization with proximity ligation assay. STAR Protoc. 2023 Feb 3;4(1):102096. doi: 10.1016/j.xpro.2023.102096. Online ahead of print.
30. Di Fazio A, Gullerova M. An old friend with a new face: tRNA-derived small RNAs with big regulatory potential in cancer biology. Br J Cancer. 2023 Feb 9. doi: 10.1038/s41416-023-02191-4. Online ahead of print.
2022
29. Ketley RF, Battistini F, Alagia A, Mondielli C, Iehl F, Balikçi E, Huber KVM, Orozco M, Gullerova M. DNA double-strand break-derived RNA drives TIRR/53BP1 complex dissociation. Cell Rep. 2022 Oct 25;41(4):111526. doi: 10.1016/j.celrep.2022.111526.
28. Alagia A, Gullerova M. The Methylation Game: Epigenetic and Epitranscriptomic Dynamics of 5-Methylcytosine. Front Cell Dev Biol. 2022 Jun 3;10:915685. doi: 10.3389/fcell.2022.915685. eCollection 2022.
27. Alagia A, Ketley RF, Gullerova M. Proximity Ligation Assay for Detection of R-Loop Complexes upon DNA Damage. Methods Mol Biol. 2022;2528:289-303. doi: 10.1007/978-1-0716-2477-7_19.
26. Di Fazio A, Schlackow M, Pong SK, Alagia A, Gullerova M. Dicer dependent tRNA derived small RNAs promote nascent RNA silencing. Nucleic Acids Res. 2022 Feb 22;50(3):1734-1752. doi: 10.1093/nar/gkac022.
2021
25. Shaw A. and Gullerova M., Home and Away: The role of Non-coding RNA in intracellular and intercellular DNA damage response. Genes. 2021 Sep 23;12(10):1475.
24. Long Q, Liu Z, Gullerova M., Sweet Melody or Jazz? Transcription Around DNA Double-Strand Breaks. Front Mol Biosci. 2021 Apr 20;8:655786
2020
23. Ketley R.F. and Gullerova M., Jack of all trades? The versatility of RNA in DNA double-strand break repair. Essays Biochem. 2020 Oct 26;64(5):721-735
2019
22. Burger K, Ketley RF and Gullerova M; Beyond the Trinity of ATM, ATR and DNA-PK: Multiple Kinases Shape the DNA Damage Response in concert with RNA metabolism. Front Mol Biosci, 2019. 6:61
21. Burger K, Schlackow M and Gullerova M; Tyrosine kinase c-Abl couples RNA polymerase II transcription to DNA double-strand breaks. Nucleic Acids Research, 2019. 47(7): 3467–3484
2018
20. Pong SK, Gullerova M; Noncanonical functions of microRNA pathway enzymes - Drosha, DGCR8, Dicer and Ago proteins. FEBS Letters, 2018. 592(17):2973-2986
19. Burger K and Gullerova M; Nuclear re-localization of Dicer in primary mouse embryonic fibroblast nuclei following DNA damage. PLOS Genetics, 2018. 14 (2): e1007151
2017
18. Burger K, Schlackow M, Hester S, Mohammed S and Gullerova M; Nuclear phosphorylated Dicer processes double-stranded RNA in response to DNA damage. J Cell Biol, 2017. 216 (8): 2373-2389
2016
17. Bhardwaj S, Schlackow M and Gullerova M; Transcription is essential for the establishment of sister chromatid cohesion on chromosomal arms. Nucleic Acids Res, 2016. 44 (14): 6676-92.
16. Neve J, Burger K, Li W, Hoque M, Patel R, Tian B, Gullerova M and Furger A; Human nuclear Dicer modulates the chromatin landscape surrounding poly(A) sites and regulates alternative cleavage and polyadenylation, Genome Res, 2016. 26 (1): 24-35.
2015
15. Burger K and Gullerova M; Swiss knives: non-canonical functions of Drosha and Dicer enzymes. Nat Rev Mol Cell Biol, 2015. 16 (7): 417-30.
14. Gullerova M; Genomic Elements in Health, Disease and Evolution, Chapter: Long non-coding RNA, Springer Science+Business Media New York 2015. ISBN: 978-1-4939-3069-2 (Print) 978-1-4939-3070-8 (Online).
2014
13. Jin J, McReynolds LA and Gullerova M; Methods in Molecular Biology, Chapter: p19 mediated enrichment of siRNAs. Methods Mol Biol, 2014. 1173: 99-111.
12. White E, Schlackow M, Kamieniarz K, Proudfoot NJ and Gullerova M; Human Dicer restricts accumulation of endogenous double strand RNA. Nat Struct Mol Biol, 2014. 21 (6): 552-9.
2013
11. Schlackow M and Gullerova M; Understanding non-coding DNA regions in yeast. Biochem Soc Trans, 2013. 41 (6): 1654-9.
10. Bhardwaj S and Gullerova M; Cohesin: Its function and relevance to cancer. J Genet Syndr Gene Ther, 2013. 4:5.
9. Schlackow M, Marguerat S, Proudfoot NJ, Bahler J, Erban R and Gullerova M; Functional analysis of 3’UTR in Schizosaccharomyces pombe. RNA, 2013. 19 (12): 1617-31.
2012
8. Gullerova M and Proudfoot NJ; Convergent transcription induces transcriptional gene silencing in fission yeast and mammalian cells. Nat Struc Mol Biol, 2012. 19 (11): 1193-201.
2011
7. Gullerova M and Proudfoot NJ; Transcription intereference and gene orientation in yeast: non coding RNA connections. Cold Spring Harb Symp Quant Biol, 2010. 75: 299-311.
6. Gullerova M, Moazed D and Proudfoot NJ; Autoregulation of convergent RNAi genes in fission yeast. Genes and Development, 2011. 25 (6): 556-68.
2010
5. Gullerova M, Proudfoot NJ; Silencing in trans: position matters in fission yeast. EMBO Rep, 2010. 11 (3): 145-6.
2008
4. Gullerova M, Proudfoot NJ; Cohesin complex promotes transcriptional termination between convergent genes in S.pombe. Cell, 2008. 132 (6): 983-995.
2007
3. Proudfoot NJ, Gullerova M; Gene silencing CUTs both ways. Cell, 2007. 131 (4): 649-51.
2. Gullerova M, Barta A, Lorkovic ZJ. Rct1, a nuclear RNA recognition motif-containing cyclophilin, regulates phosphorylation of the RNA polymerase II C-terminal domain. Mol Cell Biol 2007. 27 (10): 3601-11.
2006
1. Gullerova M, Barta A, Lorkovic ZJ; AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that interacts with SR proteins and the C-terminal domain of the RNA polymerase II. RNA. 2006. 12 (4): 631-43.